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September 27, 2012

Where’s My Clone-o-saurus?

Seeing a hadrosaur alive would be a fantastic sight. Or any non-avian dinosaur, for that matter. As lovely as today’s avian dinosaurs are, it’s their distant, extinct cousins that fire my imagination. Sadly, despite the speculations of theoretical physicist Michio Kaku, I don’t think my dinosaur dreams are going to come true.

In a Big Think video posted last week, Kaku rhapsodized about the possibility of resurrecting extinct species through genetic techniques. I’m not as optimistic as he is, especially since Kaku glosses over some essential steps in his confused editorial.

Kaku spends most of the video talking about Neanderthals and woolly mammoths. These species went extinct so recently that, in some cases, researchers can extract DNA from their remains and go about reconstructing their genomes. Pretty cool science. Whether I’ll ever be able to cuddle a fuzzy baby woolly mammoth is another matter. (I’ve heard promises ever since I was a child. I’m still waiting.) But non-avian dinosaurs obviously present a different problem. They went extinct about 66 million years ago, and, given the circumstances required for genetic preservation, there’s no hope of ever obtaining Mesozoic dinosaur DNA.

But, Kaku says, “we have soft tissue from the dinosaurs.” He makes it sound as if dinosaur skeletons are saturated with bits of prehistoric flesh. “If you take a hadrosaur and crack open the thigh bones, bingo,” he says, “You find soft tissue right there in the bone marrow.”

Kaku’s going far afield from what science has actually revealed. Since 2007, paleontologists and molecular biologists have been tussling over the possibility that some non-avian dinosaur fossils might preserved the degraded remnants of soft tissue structures such as blood vessels. A Tyrannosaurus femur kicked off the debate, which has since extended to the hadrosaur Brachylophosaurus, as well.

Even though researchers Mary Schweitzer, John Asara and colleagues have hypothesized that they’ve detected preserved proteins from remnants of dinosaur soft tissues, their results have been heavily criticized. The supposed dinosaur leftovers may be microfossils created by bacterial biofilms that broke down the creature’s bodies, and the protein analysis–which placed the supposed T. rex protein close to bird protein–might have suffered from contamination. As yet, there’s no definitive proof that non-avian dinosaur soft tissues or proteins have actually been recovered, and the debate is set to go on for years to come. Contrary to what Kaku says, you can’t simply break open a dinosaur skeleton and start scooping out marrow.

Not that preserved protein would bring us closer to resurrecting Tyrannosaurus or Brachylophosaurus, anyway. The biomolecules could tell us a bit about dinosaur biology, and possibly become another way to test evolutionary relationships, but we’d still lack dinosaur DNA. And even if we could reconstruct a dinosaur’s genome, that doesn’t mean that we could easily clone one. Much like Michael Crichton before him, Kaku skips over an essential and complicated step–the development of the embryo inside the mother. How do you go from a genetic map to a viable embryo? And how can we account for interactions between the embryo and the surrogate mother–a member of a different, living species–that could influence the experimental animal’s development?

Studying the genetics and biomolecular makeup of prehistoric organisms is a fascinating area of research. And even though the dinosaur protein issue remains contentious, the debate has the potential to refine a new way to look at dinosaurs. That’s where the real value of this science is. Non-avian dinosaurs are long gone, and I don’t believe that we’ll ever be able to bring them back to life. But the more we understand about their biology, the better we can reconstruct dinosaurs in our scientific imagination.




August 6, 2012

An Australian Jurassic Park?

Among living dinosaurs, the cassowary is one of the most fantastic. Photo by Paul IJsendoorn, from Wikipedia.

One of the reasons Jurassic Park was so successful–as a novel and a blockbuster film–is that it presented a plausible way to bring dinosaurs back to life. The idea that viable dinosaur DNA might be retrieved from bloodsucking prehistoric insects seemed like a project that could actually succeed. Even though the actual methodology is hopelessly flawed and would never work, the premise was science-ish enough to let us suspend our disbelief and revel in the return of the dinosaurs.

Nevertheless, Jurassic Park brought up the tantalizing possibility that scientists might one day resurrect a Brachiosaurus, Velociraptor or Triceratops. And every once in a while, rumors arise about someone who might just give the project a try. According to the latest round of internet gossip, Australian billionaire Clive Palmer is hoping to clone a dinosaur for an exotic vacation retreat. Palmer has since denied the rumors, but, for a moment, let’s run with the assumption that someone is going to pour millions of dollars into a dinosaur cloning project. Would it actually work?

As Rob Desalle and David Lindley pointed out in The Science of Jurassic Park and the Lost World, there were a lot of steps that Michael Crichton glossed over in his dinosaur cloning regime. The novelist never explained how scientists overcame issues of genetic contamination, figured out what a complete dinosaur genome should look like and, most important of all, figured out how to actually translate all that DNA into a viable dinosaur embryo. It’s not simply a matter of accumulating DNA pieces until scientists have mapped every gene. A creature’s genetics must be read and interpreted within a biological system that will create an actual living organism. There are innumerable hurdles to any speculative dinosaur cloning project, starting with the effort to actually obtain unaltered dinosaur DNA–something that has never been done, and may never be.

If Palmer, or anyone else, wants to create a dinosaur park, it would be far easier to set up a reserve for living dinosaurs. The cassowary–a flightless, helmeted bird–is sufficiently prehistoric-looking to make it a draw for visitors. True, it’s not a Velociraptor, but a cassowary is most certainly a dinosaur that does pack a mean kick. There are plenty of living dinosaurs that could use a hand through conservation programs, so perhaps it would be better to try to save some avian dinosaurs rather than bring their non-avian cousins back from the dead.



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